BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB036D08SP1|AL430223
(914 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig572 1787 0.0
>3x_Contig572
Length = 1850
Score = 1787 bits (900), Expect = 0.0
Identities = 905/908 (99%)
Strand = Plus / Plus
Query: 1 aggaggtctcttagattcgatcaaatcacaaacaaccttattatcgaaatatttgattgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 727 aggaggtctcttagattcgatcaaatcacaaacaaccttattatcgaaatatttgattgg 786
Query: 61 agtccattgaatttgttctttattatattcttcttgttcagatttcaaagttaactgaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 787 agtccattgaatttgttctttattatattcttcttgttcagatttcaaagttaactgaat 846
Query: 121 aaagatttgttgtaacttttcgttaacgtagttgatacaaatctgttcaaaagagttgtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 847 aaagatttgttgtaacttttcgttaacgtagttgatacaaatctgttcaaaagagttgtg 906
Query: 181 ctcgaagatttcgaacccataaatatcaagaataccgatcgatttaacggctcctgggaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 907 ctcgaagatttcgaacccataaatatcaagaataccgatcgatttaacggctcctgggaa 966
Query: 241 agctttcaatgaaacgttaacacgatcaacgatccaatcgaaaagattattgtaaatagc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 967 agctttcaatgaaacgttaacacgatcaacgatccaatcgaaaagattattgtaaatagc 1026
Query: 301 cttagccaaagcatccctcacggcagtggcttgaaccacattcaatgggacatggtacac 360
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 1027 cttagccaaagcatccctcacggcagtagcttgaaccacattcaatgggacatggtacac 1086
Query: 361 tgaccctcttcttgaaccgtgtccggtttccataactctttccaccaaacatttgatcag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1087 tgaccctcttcttgaaccgtgtccggtttccataactctttccaccaaacatttgatcag 1146
Query: 421 tagcccagaatccacttgcatcaagtatgcvacgaaatctgtcacagaagtgtctctcac 480
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 1147 tagcccagaatccacttgcatcaagtatgcaacgaaatctgtcacagaagtgtctctcac 1206
Query: 481 ttcagcattaccttcattgttttcaacaaacgttacgttaccgatccacaaaatagcgga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1207 ttcagcattaccttcattgttttcaacaaacgttacgttaccgatccacaaaatagcgga 1266
Query: 541 aagcattctgaaaatttggtcttgttcttcttgggataacccaatgacttgcatagcttt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1267 aagcattctgaaaatttggtcttgttcttcttgggataacccaatgacttgcatagcttt 1326
Query: 601 aatggtctcttgataatcatgcaagtcgtcaatagtatcaacggatgtacatccggatgc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1327 aatggtctcttgataatcatgcaagtcgtcaatagtatcaacggatgtacatccggatgc 1386
Query: 661 agaagtgtaaatgtattgatccggttgcvaaacaccgaaattctgtctgtaagtatcact 720
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 1387 agaagtgtaaatgtattgatccggttgcaaaacaccgaaattctgtctgtaagtatcact 1446
Query: 721 agcacccttcgtgaactggtaaaagatatggaaatttctttcgtttctgatctggccgac 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1447 agcacccttcgtgaactggtaaaagatatggaaatttctttcgtttctgatctggccgac 1506
Query: 781 aactctttgcttctcaagcaaatagttagtgatctgaccagcacatggctcgaattgctc 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1507 aactctttgcttctcaagcaaatagttagtgatctgaccagcacatggctcgaattgctc 1566
Query: 841 attgaacctgatttctaagtacttaccatgtctcgatgagttattatttcttagtgtctt 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1567 attgaacctgatttctaagtacttaccatgtctcgatgagttattatttcttagtgtctt 1626
Query: 901 agcgcacc 908
||||||||
Sbjct: 1627 agcgcacc 1634
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7547
Number of Sequences: 1807
Number of extensions: 7547
Number of successful extensions: 43
Number of sequences better than 1.0e-20: 1
length of query: 914
length of database: 10,358,551
effective HSP length: 16
effective length of query: 898
effective length of database: 10,329,639
effective search space: 9276015822
effective search space used: 9276015822
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)